PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.D02099.1.p
Common NameEUGRSUZ_D02099, LOC104441934
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family MYB
Protein Properties Length: 192aa    MW: 21966.7 Da    PI: 8.4808
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.D02099.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding60.73.2e-191562148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT+eEd +l + ++ +G ++WktIa++ g++R++k+c++rw++yl
  Eucgr.D02099.1.p 15 KGAWTAEEDSKLSQHIEIHGAKRWKTIAAKSGLNRCGKSCRLRWLNYL 62
                      79********************************************97 PP

2Myb_DNA-binding52.31.4e-1668113148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       rg+ + eE++l+++++++lG++ W++Ia +++ gRt++++k++w+++l
  Eucgr.D02099.1.p  68 RGNISDEEEDLILRLHRLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 113
                       7899******************.*********.************986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129417.91062IPR017930Myb domain
SMARTSM007171.6E-151464IPR001005SANT/Myb domain
SuperFamilySSF466893.45E-2914109IPR009057Homeodomain-like
PfamPF002491.3E-161562IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.9E-241669IPR009057Homeodomain-like
CDDcd001672.56E-111762No hitNo description
PROSITE profilePS5129426.48763117IPR017930Myb domain
SMARTSM007177.1E-1667115IPR001005SANT/Myb domain
PfamPF002494.6E-1568113IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.602.3E-2570118IPR009057Homeodomain-like
CDDcd001671.21E-1072113No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009957Biological Processepidermal cell fate specification
GO:0010090Biological Processtrichome morphogenesis
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0048481Biological Processplant ovule development
GO:0048629Biological Processtrichome patterning
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    Send to blast
MAPKNDESAK KVMSKGAWTA EEDSKLSQHI EIHGAKRWKT IAAKSGLNRC GKSCRLRWLN  60
YLRPNIKRGN ISDEEEDLIL RLHRLLGNRW SLIAGRLPGR TDNEIKNYWN SHLSKKINQR  120
QEVSTAQETT SQLRTRVAAP MEEEGANIVG SSEPTFDVNE FFDFSTEGSY GLEWVNKFLE  180
LDEDRCLTEK R*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1h8a_C4e-301311725128MYB TRANSFORMING PROTEIN
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.D02099.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010053502.11e-141PREDICTED: transcription factor MYB114-like
RefseqXP_010053503.11e-141PREDICTED: transcription factor MYB114-like
SwissprotP102902e-52MYBC_MAIZE; Anthocyanin regulatory C1 protein
TrEMBLA0A059CIQ31e-141A0A059CIQ3_EUCGR; Uncharacterized protein
STRINGVIT_00s0341g00050.t011e-88(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM4282646
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14750.19e-53myb domain protein 66